José Borbinha – PRECISE Project https://www.precisemed.org Fri, 05 Oct 2018 12:08:19 +0000 en-GB hourly 1 https://wordpress.org/?v=5.5.3 PRECISE is applying NLP to Reuma.pt https://www.precisemed.org/precise-is-collaborating-with-reuma-pt/ Sat, 22 Sep 2018 18:49:32 +0000 https://www.precisemed.org/?p=890 The goal of the Rheumatic Diseases Portuguese Register (Reuma.pt) is “to register all rheumatic patients treated with biological agents in mainland Portugal, Madeira and the Azores, ensuring effective monitoring of treatment indication, efficacy and safety.”

Researchers of the INESC-ID are applying natural language processing (NLP) techniques to the free text annotations in Reuma.pt records with the purpose of transforming that (only human readable) “raw data” in structured (machine readable) information…

 

]]> PRECISE publication in Plos One https://www.precisemed.org/publication-in-plos-one/ Thu, 20 Sep 2018 16:45:02 +0000 https://www.precisemed.org/?p=688 Whole gene sequencing identifies deep-intronic variants with potential functional impact in patients with hypertrophic cardiomyopathy.

[Bibliographic reference] Mendes de Almeida R, Tavares J, Martins S, Carvalho T, Enguita FJ, Brito D, Carmo-Fonseca M, Lopes LR. (2017) “Whole gene sequencing identifies deep-intronic variants with potential functional impact in patients with hypertrophic cardiomyopathy.” Plos One 12(8):e0182946. URL: https://doi.org/10.1371/journal.pone.0182946

]]> PRECISE researchers win international competition https://www.precisemed.org/researchers-win-international-competition-2/ Fri, 24 Aug 2018 18:11:56 +0000 https://www.precisemed.org/?p=614 An algorithm developed by Miguel Monteiro and Arlindo Oliveira won the third edition of the ISLES challenge 2017

The algorithm allows to infer classifiers that determine authomatically the affected brain areas by ischemic stroke lesions…

]]> PRECISE deployed an HPC Cluster https://www.precisemed.org/hpc-cluster-at-imm/ Fri, 24 Aug 2018 18:07:49 +0000 https://www.precisemed.org/?p=611 PRECISE team deployed an high performance computing cluster (HPC) at IMM. This cluster is available as a private HPC computing resource within the IMM…

(image source: Wikipedia)

]]> PRECISE private Cloud https://www.precisemed.org/precise-cloud-at-inesc-id-ist/ Fri, 24 Aug 2018 18:07:08 +0000 https://www.precisemed.org/?p=609 A cluster was built at INESC-ID/IST with 60 cores (120 threads), 756GB of RAM, and 1.44TB high speed SDD storage (structured as 6 computing nodes, each with 10 cores, 20 threads, 128GB of RAM, and 240GB of storage each).
These resources are integrated in a OpenStack (https://www.openstack.org/) installation, allowing the dynamic and on demand allocation and management of resources. The elasticity provided by this pilot allows the efficient and isolated deployment of the multiple applications being developed in the project, each one with different computational requirements and lifetime.

(image source: Wikipedia)

]]> PRECISE produces National Stroke Database https://www.precisemed.org/national-stroke-database/ Fri, 24 Aug 2018 18:06:02 +0000 https://www.precisemed.org/?p=607 PRECISE deployed in production a National Stroke Database.

This database is available to all the hospitals collaborating in PRECISE…

 


(image source: Wikipedia)

Test deploy (feel free to play with it):

http://stroketest.sysresearch.org

 

 

Production deploy (in use… for only registered users of the hospitals collaborating in PRECISE):

https://stroke.precisemed.org

 

]]> (book) The Digital Mind – How Science Is Redefining Humanity https://www.precisemed.org/the-digital-mind-how-science-is-redefining-humanity/ Thu, 01 Mar 2018 19:57:49 +0000 https://www.precisemed.org/?p=894 Book “The Digital Mind – How Science Is Redefining Humanity” published by a researcher of the PRECISE team…

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